Let be the concentration of a binary master sequence of length and let be the total concentration of all mutant sequences. Master sequences try to self-replicate at a total rate , but each independent digit is only copied correctly with probability . Mutant sequences self-replicate at a total rate , where , and the probability of mutation back to the master sequence is negligible.
(a) The evolution of is given by
Write down the corresponding equation for and derive a differential equation for the master-to-mutant ratio .
(b) What is the maximum length for which there is a positive steady-state value of ? Is the positive steady state stable when it exists?
(c) Obtain a first-order approximation to assuming that both and , where the selection coefficient is defined by .