An allosteric enzyme E reacts with a substrate S to produce a product P according to the mechanism
S+Ek−1⇌k1C1⟶k2E+PS+C1k−3⇌k3C2→k4C1+P
where C1 and C2 are enzyme-substrate complexes. With lowercase letters denoting concentrations, write down a system of differential equations based on the Law of Mass Action which model this reaction mechanism.
The initial conditions are s=s0,e=e0,c1=c2=p=0. Using u=s/s0, vi=ci/e0,τ=k1e0t and ϵ=e0/s0, show that the nondimensional reaction mechanism reduces to
dτdu=f(u,v1,v2) and ϵdτdvi=gi(u,v1,v2) for i=1,2
finding expressions for f,g1 and g2.