A bacterial nutrient uptake model is represented by the reaction system
2S+ECC⟶k3⟶k1⟶k22S+EE+2PC
where the ki are rate constants. Let s,e,c and p represent the concentrations of S,E,C and P respectively. Initially s=s0,e=e0,c=0 and p=0. Write down the governing differential equation system for the concentrations.
Either by using the differential equations or directly from the reaction system above, find two invariant quantities. Use these to simplify the system to
s˙c˙=−2k1s2(e0−c)+2k2c=k1s2(e0−c)−(k2+k3)c.
By setting u=s/s0 and v=c/e0 and rescaling time, show that the system can be written as
u′ϵv′=−2u2(1−v)+2(μ−λ)v=u2(1−v)−μv
where ϵ=e0/s0 and μ and λ should be given. Give the initial conditions for u and v.
[Hint: Note that 2X is equivalent to X+X in reaction systems.]